Henderson Harbor, NY (AKA Henderson Bay), Fishing – Articles, Species and Seasonal Tips

Fishing in Henderson Harbor, or more accurately, fishing in Henderson Bay opens fishermen to a world of angling possibilities. Henderson Bay contains a variety of fish species including brown trout, trophy walleye, salmon, largemouth and smallmouth bass, and northern pike, perch, and crappie.

 A fisherman holds up a trophy walleye while squatting on a boat dock.

Clarification: Henderson Harbor Vs. Henderson Bay Vs. Henderson, NY

The body of water on the eastern shores of Lake Ontario, in Jefferson County and in the Town of Henderson, NY is called Henderson Bay. Also, in the Town of Henderson, NY is a community called Henderson Harbor, NY. Most people know this community as the Village of Henderson Harbor; however, many online resources suggest that the Henderson Harbor is unincorporated and therefore a Hamlet. Henderson Harbor, NY has a population of approximately 200. 

Throughout the remainder of this article, we will attempt to use the terms Henderson Harbor and Henderson Harbor according to this understanding. 

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Henderson Bay draws anglers with diverse fish populations and boaters with calm waters. Marinas hum with activity, restaurants promote fresh catches, and shops cater to fishing needs. 

Henderson Bay’s waters reach a maximum depth of approximately 25-30 feet, with an average depth of between 10-14 feet. This shallower profile creates a distinct environment compared to the vastness of Lake Ontario. Despite its modest depth, the harbor teems with life, offering a variety of fish to target.

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Seasonal Fishing Techniques by Species

Spring (March to May)

In spring, Henderson Bay transforms into a fisherman’s paradise, offering diverse opportunities to target trophy smallmouth bass and tasty perch.

For aggressive smallmouth bass, cast soft plastics, jerkbaits, or crankbaits near rocky structures in shallow areas. These lure choices mimic baitfish, triggering their predatory instincts. 

A child holds a massive smallmouth bass, posing for the camera with a big smile.

Perch fishermen find success using live minnows or specific jigs like tube jigs or curly-tails. Target structures like weed beds or rocky outcrops, and don’t be afraid to experiment with different jig styles to find what the fish are feeding on. Experimentation and adaptation are key to Henderson Bay fishing in the spring!

Summer (June to August)

In the warm summer months, northern pike become increasingly active in Henderson Bay. To make the most of this period, effective use of topwater lures and swimbaits is recommended. Brands like Rapala, Heddon, and Berkley offer a range of topwater lures and swimbaits in various colors and sizes, perfectly mimicking the prey of northern pike. 

A small pike being held by a fisherman alongside boats docked at a lake.

Bright colors such as yellow, green, and red are particularly effective in attracting these aggressive predators. Anglers should employ techniques like steady retrieval mixed with occasional twitches to mimic injured fish, thereby enticing pike to strike.

For targeting smallmouth bass, the strategy shifts towards deeper waters. A mix of crankbaits and soft plastics becomes essential, with brands like Strike King and Zoom leading the pack. 

Crankbaits in natural fish patterns are effective for exploring various depths, while soft plastics in dark greens and browns can mimic the crayfish and other bottom dwellers smallmouth bass prey upon. Techniques such as drop shotting or using a football jig can be particularly effective in these conditions.

Strategic timing is crucial; early mornings and late evenings offer the best conditions for both northern pike and smallmouth bass. The cooler temperatures during these times reduce the overall water temperature, making fish more active and likely to feed. This is especially true for targeting larger smallmouth bass in deeper areas, where they tend to retreat during the hottest parts of the day.

Fall (September to November)

As fall takes hold from September through November, anglers eagerly anticipate the salmon and brown trout runs/migration. This period marks a significant shift in fishing strategies, as these prized species venture from the depths of Lake Ontario, near areas like Gallo Island, Little Gallo Island, Calf Island, and Stony Island, towards Henderson Bay.

A large boat-caught brown trout is held up by a male fisherman.

The spawning season for these species in New York State typically begins in late summer and continues into the fall, with variations depending on water temperatures and conditions. During this time, the fish become more aggressive and are often more focused on reaching their spawning grounds, making them less likely to feed. However, anglers can still target them during their migration towards these spawning areas, using tactics and lures that mimic the natural prey of the fish or provoke territorial strikes.

The beginning of fall sees salmon and brown trout deep within Lake Ontario, prompting anglers to adopt trolling with downriggers as the go-to method. This technique allows for precise depth targeting, essential for reaching the salmon and brown trout during their migratory journey. 

The effectiveness of trolling in these conditions is enhanced by selecting the right lure size and color, adjusting to the water’s clarity and temperature. Brands such as Luhr-Jensen, Michigan Stinger, and Silver Horde offer a wide variety of spoons and flashers that are highly effective in these conditions. Bright colors like orange, green, and blue, depending on the day’s light and water clarity, can make a significant difference in attracting these fish.

As the season progresses and water temperatures begin to drop, salmon and brown trout move into shallower waters, including those within Henderson Bay itself. This shift necessitates a change in tactics, with trolling using planer boards becoming increasingly effective. Utilizing spoons, flashers, and flies to mimic the natural prey of these species can lead to successful catches. The use of planer boards allows lures to be spread out over a wider area, increasing the chances of attracting fish.

Near Watertown, just south of Henderson Harbor, the Black River has sections that can provide habitat for spawning salmon and brown trout. The lower reaches of the river, closer to where it meets Lake Ontario, are particularly relevant during the migration season.

Although smaller, Grindstone Creek is another tributary that flows into Lake Ontario and can see migrations of salmon and brown trout. Its proximity to Henderson Harbor makes it a potential spot for anglers targeting these species during the spawning season.

Located west of Henderson Harbor, Sandy Creek offers pathway for salmon and brown trout moving into spawning grounds. This creek has a mix of public and private access, with portions that can be productive for fishing during the migration period.

Not to be confused with Stony Island in Lake Ontario, the tributary Stony Creek attracts spawning salmon and brown trout. Its accessibility and habitat can vary, so it’s worth researching current conditions before planning a trip.

Winter (December to February)

Winter introduces opportunities for ice fishing on Henderson Bay with rules for yellow perch and walleye needing consideration. 

A walleye held upright by a fisherman at the hull of his boat surrounded by a lake and woodland.

For yellow perch, a favorite among ice anglers fishing on Henderson Bay, small jigs tipped with spikes or wax worms are highly effective. These lures mimic the small invertebrates that perch feed on during the winter. Fishing near the bottom is a proven strategy, as perch tend to school in deeper areas searching for warmth and food.

Brands like HT Enterprises, Clam, and Jiffy offer specialized ice fishing jigs and gear designed to enhance your chances of a successful catch.

A walleye landed from a kayak being hoisted from the net using boga grips.

Walleye require a slightly different approach. Using minnows on tip-ups or jigging with spoons and ice jigs can be particularly effective. Walleye are known to be more active during low-light conditions, such as early morning or late afternoon, making these optimal times for targeting them. Brightly colored lures, or those that glow, can be especially attractive to walleye under the ice.

Understanding and following the regulations set forth for ice fishing is crucial. Anglers targeting yellow perch and walleye should be aware of the minimum size limits and daily catch limits to ensure sustainable fishing practices. These regulations are designed not only to protect fish populations but also to ensure that future generations can enjoy ice fishing in Henderson Harbor.

Safety cannot be overstated when it comes to ice fishing. Ensuring that the ice is thick enough to support your weight is the first step. A minimum of 4 inches of clear, solid ice is generally considered safe for a single angler, but conditions can vary greatly across different parts of Henderson Harbor. Using a spud bar to check the ice as you go, wearing ice picks around your neck, and having a rope are essential safety measures.

Dressing in layers, using insulated waterproof boots, and bringing along a portable shelter can make your ice fishing experience not only safer but also more enjoyable. Technologies like portable fish finders or ice fishing flashers can also enhance your success by helping you locate schools of fish beneath the ice.

What Henderson Harbor is Known For

Henderson Harbor, between Westcott Beach and Southwick Beach state parks, is renowned for its rich fishing history and the remarkable catches that have made it a destination for anglers. One noteworthy achievement was the capture of a colossal lake trout weighing an impressive thirty-six pounds, an accomplishment attributed to the Milky Way Fishing Charter. 

Frank Dziczek, among the trio of Pennsylvania anglers on the charter, landed this massive fish during their expedition on Lake Ontario. This catch not only set a record for the Milky Way but was deemed one of the largest ever caught in Henderson Bay. 

Captain Scott, with thirty-three years of chartering experience, affirmed that it was the most significant catch in his career. As of now, this remarkable fishing record still stands, leaving an indelible mark on the local fishing legacy.

Henderson Harbor, with its picturesque scenery and historical significance, has been a haven for fishing enthusiasts for centuries. Samuel de Champlain, the first European explorer to witness the bay’s beauty in 1615, set the stage for a tradition that continues to thrive today. 

The fishing community in Henderson Harbor has become a way of life, with fishing charter guides offering exciting trips for pleasure and rewarding catches. Additionally, the bay provides a deep-water port for sailors, hosting events like Olympic sailing trials in the past. 

Boat Ramps, Boat Launches, Marinas, and Public Access Points

From Interstate 81, take exit 41 and head west on Route 178 for about 10 miles until you reach Henderson, NY. Once in Henderson, make a left turn at the intersection by the firehouse and library. Continue until you reach a stop sign, and then cross Route 3. Immediately after crossing Route 3, take a right turn onto Harbor Road.

In Henderson, you’ll discover multiple points of access to the lake. Explore various boat launches, including those near the yacht club, where you can enjoy the convenience of launching your boat into the pristine waters. 

The marinas along the lakefront offer additional amenities, such as docking facilities, supplies, and possibly even lakeside dining. If you’re interested in renting a boat, inquire at the local boat rental services for an exciting day on the lake.

These directions should lead you to Harbor Road in Henderson, ensuring that you have options for boat launches, marinas, and even a yacht club to enhance your experience on the lake.

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FAQs About Fishing Henderson Harbor

Henderson Harbor, situated on the eastern shores of Lake Ontario, offers a prime location for fishing enthusiasts due to its rich biodiversity and flourishing aquatic ecosystem. The harbor’s strategic location, coupled with the variety of fish species available, including brown trout, walleye, salmon trout, bass, and pike, makes it a desirable destination for anglers seeking diverse fishing opportunities.

In summer, the warmer water temperatures in Henderson Bay trigger heightened predatory behavior in northern pike. Anglers strategically use topwater lures, creating surface disturbances to mimic wounded prey. Swimbaits, with lifelike swimming actions, capitalize on the aggressive feeding behavior of northern pike during this season.

Fishermen fishing Henderson Bay cast their lines in pursuit of a diverse range of fish species, including brown trout, trophy walleye, salmon, bass, and pike. The harbor’s draw lies in its rich biodiversity and flourishing aquatic ecosystem, making it a prime destination for fishing enthusiasts seeking a variety of opportunities. The strategic location of Henderson Harbor on the eastern shores of Lake Ontario further enhances its desirability, as it contributes to the Lake Ontario’s fishing reputation.

During the fall salmon migration at Henderson Harbor, anglers shift their focus to the highly anticipated movement of salmon and brown trout. Venturing beyond the harbor into the expansive waters of Lake Ontario becomes essential during this period. Trolling remains a primary technique, utilizing spoons, flashers, and flies to entice these migratory species actively feeding in the open waters. Downriggers, with their precise depth control, prove effective for reaching the depths where these fish swim. Adhering to regulations specific to salmon and brown trout is critical for ethical and responsible angling, ensuring a sustainable approach to fishing in the expansive waters of Lake Ontario.

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